Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845606.1_cds_XP_016509377.1_22314
CDS Infomation

[gene=LOC107826862] [db_xref=GeneID:107826862] [protein=fimbrin-1-like] [protein_id=XP_016509377.1] [location=join(4412..4495,4613..4783,5346..5584,5686..5857,5943..5981,6194..6262,6358..6474,7388..7599,8212..8367,8523..8722,9714..9871,9958..10054,10579..10670,11086..11340,11390..11677)] [gbkey=CDS]
Sequence

ATGTCTTTCGTTGGTGTTTTTGTTTCTGATCAATGGCTTCAAAGTCAATTCACTCAAGTC
GAACTTCGCAGCCTTAAATCCAAATTCATTTCAGTTAAGAATCAGAATGGAAAAGTAACA
ATTGGAGACTTGCCGCCTTTGATGGCGAAATTAAAGGCTTTCAATGAGATGTTTAATGAG
GAAGAGATCCGGAATATCTTGGCTGAATCAGTTTCCGACTTGAATGATGAGATTGATTTT
GAAAGCTTCCTTAACACATACTTGAATCTACAAGCTCGAGCTGCCTCTAAATTAGGCAGT
TCTAAAAATTCGTCTTCCTTCCTGAAGGCCTCCACAACTACACTTCTTCACACGATCAGT
GAATCAGAGAAAGCATCATATGTAGCTCATATAAACAGCTATCTAAGAGACGATCCATTC
TTAAAGCAATTTCTTCCAATCGATCCAGCTTCGAATGCTTTGTTTGATCTGGCAAAGGAT
GGAGTTCTTTTATGTAAGCTGATCAATGTCGCTGTACCTGGCACAATAGACGAGCGAGCT
ATTAACATGAAACGAGTAATCAACCCGTGGGAGAGAAATGAGAATCACACCCTTTGCCTC
AATTCTGCAAAGGCTATTGGCTGCACTGTTGTTAATATTGGCACTCAAGACCTGGTTGAA
GGACGACCTCATCTAGTACTTGGGCTGATTTCTCAAATTATCAAGATCCAATTATTGGCA
GATCTCAACCTCCGGAAGACCCCTCAGCTCGTCGAACTGGTGGAGGACAGCAATGATGTT
GAGGAGCTCATGGGGTTAGCACCAGAAAAGCTCTTACTAAAATGGATGAATTTTCATCTA
AAGAAAGCTGGTTACAAGAAAACAGTAGCAAATTTTTCTTCTGACCTGAAGGACGGGGAA
GCCTATGCTTACCTTCTTAATGTACTTGCACCAGAGCATTGCAGCCCAGCGACTTTGGAT
GTCAAGGATCCCACTGAGAGAGCTAACTTAGTTCTTGAGCATGCAGAGAAAATGGATTGC
AAAAGATATCTAGATCCGAAGGACATCGTTGAAGGCTCTTCCAATTTAAATCTTGCTTTT
GTTGCACAGATATTCCATCAGAGGAGTGGATTGTCTACTGACAGCAAGAAGGTCTCCTTT
GCAGAGATGATGACAGATGACGAGTTAATTTCCAGGGAAGAGAGATGCTTTCGACTATGG
ATTAATAGTCTCGGGATAAACTCTTACGTCAATAATTTGTTTGAAGATGTCAGAAATGGA
TGGGTACTTTTGGAGGTATTGGACAAGGTTTCTCCAGGATCTGTTAATTGGAAGCATGCA
ACAAAACCTCCAATTAAAATGCCATTTCGGAAAGTTGAAAACTGCAACCAAGTTGTCAGG
ATTGGGAAGCAGTTGAAACTTTCCCTTGTAAATGTGGGTGGAAATGACTTTGTCCAAGGG
AATAAGAAGCTTATACTTGCTTTCCTGTGGCAGTTGATGAGGTTTAATATGCTTCAGCTT
TTGAAGAACTTGAGATCGCGTTTCCGAGGGAAGGAGATTACTGACGCTGATATTCTAGTT
TGGGCAAACAAAAAAGTGAAAAGCACTGGAAGAACATCTAAAATGGAGAGTTTTAAGGAT
AAGAATCTTTCAAGTGGATTATTCTTTCTCGAGCTTCTCAGTGCTGTGGAGCCAAGGGTT
GTTAATTGGAATCTTGTTACCAAGGGTGAAAGTGATGAGGCAAAGAAACTGAATGCTACT
TATATCATTAGCGTTGCACGGAAACTTGGGTGCTCTATCTTTCTGTTGCCTGAGGATATC
ATGGAGGTTAACCAAAAGATGATCCTTACTCTCACTGCGAGCATAATGTACTGGAGCCTT
CAGCAGACAGCGGAAGAGGCGGAGTCTGCATCTCCTGCGAGTACTATAACTGATGCATCA
CCAGTACGATCTACAAATGGTTCAATGTCCCCCTTGATTGCTGCTTCGCCTGATGCATCC
CCTGCACCGTCAATTAGTGGAGCATCCTCTCCTGTGGTGGATGCATCTCCAGCACCGTCT
GTCAATGGAGATGAAGAAAGNTTGGCAGATGATGACGCATCGTCTGATGTGTTAGCATCC
CCAGAGCAGGCTGAAAATGCAGAGATACCATCAGATGTGCACAGGGATGCTGAAAATGCA
GAGATACCATCAGATGTGCACAGGGATGCTGAAAATGCAGAGATACCAACAGATGTTTGC
GCGGATGCTGAAAATGCGGAGATACCATCAGATATGCCCTCATCCCCGCAACTTGAGGAT
ACAGAGCAACAGAGTGGCCTCTCACATGAAGTTGAAAATGAGGGTACAAAACCAGATAAT
GAACAATAG

Peptide Sequence

PEP ID

XP_016509377.1
PEP Infomation

PREDICTED: fimbrin-1-like [Nicotiana tabacum]
Sequence

MSFVGVFVSDQWLQSQFTQVELRSLKSKFISVKNQNGKVTIGDLPPLMAKLKAFNEMFNE
EEIRNILAESVSDLNDEIDFESFLNTYLNLQARAASKLGSSKNSSSFLKASTTTLLHTIS
ESEKASYVAHINSYLRDDPFLKQFLPIDPASNALFDLAKDGVLLCKLINVAVPGTIDERA
INMKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLLA
DLNLRKTPQLVELVEDSNDVEELMGLAPEKLLLKWMNFHLKKAGYKKTVANFSSDLKDGE
AYAYLLNVLAPEHCSPATLDVKDPTERANLVLEHAEKMDCKRYLDPKDIVEGSSNLNLAF
VAQIFHQRSGLSTDSKKVSFAEMMTDDELISREERCFRLWINSLGINSYVNNLFEDVRNG
WVLLEVLDKVSPGSVNWKHATKPPIKMPFRKVENCNQVVRIGKQLKLSLVNVGGNDFVQG
NKKLILAFLWQLMRFNMLQLLKNLRSRFRGKEITDADILVWANKKVKSTGRTSKMESFKD
KNLSSGLFFLELLSAVEPRVVNWNLVTKGESDEAKKLNATYIISVARKLGCSIFLLPEDI
MEVNQKMILTLTASIMYWSLQQTAEEAESASPASTITDASPVRSTNGSMSPLIAASPDAS
PAPSISGASSPVVDASPAPSVNGDEEXLADDDASSDVLASPEQAENAEIPSDVHRDAENA
EIPSDVHRDAENAEIPTDVCADAENAEIPSDMPSSPQLEDTEQQSGLSHEVENEGTKPDN
EQ

Transcript Sequence

Gene sequence data has not been registered.